2022
Rodrigues LJ, Padilla-Gamiño JL (accepted) Trophic provisioning and parental trade-offs lead to successful reproductive performance in corals after a bleaching event. Scientific Reports.
Padilla-Gamiño JL, Alma L, Spencer L, Venkataraman Y, Wessler L (accepted) Ocean acidification does not overlook sex: Review of understudied effects and implications of low pH on marine invertebrate sexual reproduction. Frontiers in Marine Science
Halpern B, Boettiger C, Dietze M, Gephart JA, Gonzalez P, Grimm NB. Groffman PM, Gurevitch J, Hobbie SE….Padilla-Gamiño JL… (accepted) Priorities for synthesis in ecology and environmental science. Ecosphere
Olsen AY, Larson S, Padilla-Gamiño JL, Klinger T (accepted) Changes in Fish Assemblages after Marine Heatwave Events in West Hawai‘i Island. Marine Ecology Progress Series.
Viladrich N, Linares C, Padilla-Gamiño JL (accepted) Lethal and sublethal effects of thermal stress on octocorals early life history stages. Global Change Biology.
Phan S, Padilla-Gamiño JL, Luscombe CK (2022) The effect of weathering environments on microplastic chemical identification with Raman and IR spectroscopy. Part I. Polyethylene and Polypropylene. Polymer Testing
Martinelli JC, Spencer LH, Alma L, Padilla-Gamiño JL, and Wood CL (2022) Evaluating treatments for shell-boring polychaete (Annelida: Spionidae) infestations of Pacific oysters (Crassostrea gigas) in the US Pacific Northwest. Aquaculture.
Klohmann C & Padilla-Gamiño JL (2022) Pathogen Filtration: and untapped ecosystem service. Frontiers in Microbiology. Special issue Microbes from Marine Distinct Environments.
Martínez-Castillo V*, Rodríguez-Troncoso AP, Tortolero-Langarica JA, Bautista-Guerrero E, Padilla-Gamiño JL, Cupul-Magaña AL (2022) Coral performance and bioerosion in Central Mexican Pacific reef communities. Hydrobiologia.
Axworthy JB, Timmins-Schiffman E, Brown T, Rodrigues LJ, Nunn BL, Padilla-Gamiño JL (2022) Shotgun proteomics identifies active metabolic pathways in bleached coral tissue and intraskeletal compartments. Frontiers in Marine Science
2021
Brown T, Jesse Zaneveld, Dylan Sonett, Padilla-Gamiño JL (2021) Characterization of the microbiome and immune response in corals with chronic Montipora white syndrome. Molecular Ecology.
Bednaršek N, Calosi P, Feely R, Ambrose R, Byrne M, Chan K, Dupont S, Padilla-Gamiño JL, Spicer JI, Kessouri F, McLaughlin K, Roethler M, Sutula M, Weisberg SB (2021) Synthesis of Thresholds of Ocean Acidification Impacts on Calcifying Echinoderms. Frontiers in Marine Science.
Bates E, Alma L, Ugrai T, Gagnon A, Maher M, McElhany P, Padilla-Gamiño JL (2021) Evaluation of the effect of local water chemistry on trace metal accumulation in Puget Sound shellfish shows that concentration varies with species, size, and location. Frontiers of Marine Science.
2020
Grottoli AG, Toonen RJ, van Woesik R, Vega Thurber R, Warner ME, McLachlan RH, Price J, Bahr KD, Baums IB, Castillo K, Coffroth MA, Cunning R, Dobson K, Donahue M, Hench J, Iglesias-Prieto R, Kemp D, Kenkel CD, Kline D, Kuffner IB, Matthews J, Mayfield A, Padilla-Gamiño JL, Palumbi S, Voolstra CR, Weis VM, Wu H (accepted) Best Practice Recommendations for Coral Bleaching Experiments. Ecological Applications.
Dundas SJ, Levine A, Lewison RL, Samhouri JF, White C, Galloway AWE, Hazen EL, Spalding A, Stier A, Doerr A, Garza C, Hill T, Padilla-Gamiño JL, White JW (2020) Integrating Oceans into Climate Policy: Any Green New Deal Needs a Splash of Blue. Conservation Letters, e12716.
Martinelli JC, Lopes HM, Jimenez-Hidalgo I, King TL, Padilla-Gamiño JL, Rawson, Spencer L, Williams J, Wood C. (2020) Confirmation of the shell-boring oyster parasite Polydora websteri (Polychaeta: Spionidae) in Washington State, USA. Scientific Reports 10:3961.
Martinelli JC, Samantha Pam, Christine K. Luscombe, Padilla-Gamiño JL (2020) Low incidence of microplastic contaminants in Pacific oysters from the Salish Sea. Science of the Total Environment 715:136826.
Alma L, Kram K, Holtgrieve GW, Arambula A, Fiamengo C, Padilla-Gamiño JL (2020) Ocean Acidification and warming affect the physiology and microbial diversity of the Purple-Hinge Rock Scallop. Comparative Biochemistry and Physiology, Part A. 240:110579
2019
Axworthy J & Padilla-Gamiño JL (2019) Microplastics ingestion by thermally stressed reef building corals. Scientific Reports 9:18193 (press release).
Price NN, Muko S, Legendre L, Steneck R,…. Padilla-Gamiño JL, …Edmunds P (2019) Global biogeography of coral recruitment: tropical decline and subtropical increase. Marine Ecology Progress Series 621:1-17 (press release).
Padilla-Gamiño JL, Roth MS, Rodrigues LJ, Bradley CJ, Bidigare RR, Gates RD, Smith CM, Spalding HL (2019) Ecophysiology of mesophotic reef-building corals in Hawaii is influenced by symbiont-host associations, trophic plasticity and photoacclimatization processes.
Limnology and Oceanography (press release/video link).
Spalding HL, Bowen B, Copus, J, Kosaki R, Longenecker K, Montgomery A, Padilla-Gamiño JL, Parrish F, Roth MS, Toonen R, Pyle R. (2019) Mesophotic Coral Ecosystems in Hawaii. In Puglise, K, Loya, Y and Bridge, T (Eds.). Coral Reefs of the World: Mesophotic Ecosystems. Springer.
Rodrigues LJ, Padilla-Gamiño JL (accepted) Trophic provisioning and parental trade-offs lead to successful reproductive performance in corals after a bleaching event. Scientific Reports.
Padilla-Gamiño JL, Alma L, Spencer L, Venkataraman Y, Wessler L (accepted) Ocean acidification does not overlook sex: Review of understudied effects and implications of low pH on marine invertebrate sexual reproduction. Frontiers in Marine Science
Halpern B, Boettiger C, Dietze M, Gephart JA, Gonzalez P, Grimm NB. Groffman PM, Gurevitch J, Hobbie SE….Padilla-Gamiño JL… (accepted) Priorities for synthesis in ecology and environmental science. Ecosphere
Olsen AY, Larson S, Padilla-Gamiño JL, Klinger T (accepted) Changes in Fish Assemblages after Marine Heatwave Events in West Hawai‘i Island. Marine Ecology Progress Series.
Viladrich N, Linares C, Padilla-Gamiño JL (accepted) Lethal and sublethal effects of thermal stress on octocorals early life history stages. Global Change Biology.
Phan S, Padilla-Gamiño JL, Luscombe CK (2022) The effect of weathering environments on microplastic chemical identification with Raman and IR spectroscopy. Part I. Polyethylene and Polypropylene. Polymer Testing
Martinelli JC, Spencer LH, Alma L, Padilla-Gamiño JL, and Wood CL (2022) Evaluating treatments for shell-boring polychaete (Annelida: Spionidae) infestations of Pacific oysters (Crassostrea gigas) in the US Pacific Northwest. Aquaculture.
Klohmann C & Padilla-Gamiño JL (2022) Pathogen Filtration: and untapped ecosystem service. Frontiers in Microbiology. Special issue Microbes from Marine Distinct Environments.
Martínez-Castillo V*, Rodríguez-Troncoso AP, Tortolero-Langarica JA, Bautista-Guerrero E, Padilla-Gamiño JL, Cupul-Magaña AL (2022) Coral performance and bioerosion in Central Mexican Pacific reef communities. Hydrobiologia.
Axworthy JB, Timmins-Schiffman E, Brown T, Rodrigues LJ, Nunn BL, Padilla-Gamiño JL (2022) Shotgun proteomics identifies active metabolic pathways in bleached coral tissue and intraskeletal compartments. Frontiers in Marine Science
2021
Brown T, Jesse Zaneveld, Dylan Sonett, Padilla-Gamiño JL (2021) Characterization of the microbiome and immune response in corals with chronic Montipora white syndrome. Molecular Ecology.
Bednaršek N, Calosi P, Feely R, Ambrose R, Byrne M, Chan K, Dupont S, Padilla-Gamiño JL, Spicer JI, Kessouri F, McLaughlin K, Roethler M, Sutula M, Weisberg SB (2021) Synthesis of Thresholds of Ocean Acidification Impacts on Calcifying Echinoderms. Frontiers in Marine Science.
Bates E, Alma L, Ugrai T, Gagnon A, Maher M, McElhany P, Padilla-Gamiño JL (2021) Evaluation of the effect of local water chemistry on trace metal accumulation in Puget Sound shellfish shows that concentration varies with species, size, and location. Frontiers of Marine Science.
2020
Grottoli AG, Toonen RJ, van Woesik R, Vega Thurber R, Warner ME, McLachlan RH, Price J, Bahr KD, Baums IB, Castillo K, Coffroth MA, Cunning R, Dobson K, Donahue M, Hench J, Iglesias-Prieto R, Kemp D, Kenkel CD, Kline D, Kuffner IB, Matthews J, Mayfield A, Padilla-Gamiño JL, Palumbi S, Voolstra CR, Weis VM, Wu H (accepted) Best Practice Recommendations for Coral Bleaching Experiments. Ecological Applications.
Dundas SJ, Levine A, Lewison RL, Samhouri JF, White C, Galloway AWE, Hazen EL, Spalding A, Stier A, Doerr A, Garza C, Hill T, Padilla-Gamiño JL, White JW (2020) Integrating Oceans into Climate Policy: Any Green New Deal Needs a Splash of Blue. Conservation Letters, e12716.
Martinelli JC, Lopes HM, Jimenez-Hidalgo I, King TL, Padilla-Gamiño JL, Rawson, Spencer L, Williams J, Wood C. (2020) Confirmation of the shell-boring oyster parasite Polydora websteri (Polychaeta: Spionidae) in Washington State, USA. Scientific Reports 10:3961.
Martinelli JC, Samantha Pam, Christine K. Luscombe, Padilla-Gamiño JL (2020) Low incidence of microplastic contaminants in Pacific oysters from the Salish Sea. Science of the Total Environment 715:136826.
Alma L, Kram K, Holtgrieve GW, Arambula A, Fiamengo C, Padilla-Gamiño JL (2020) Ocean Acidification and warming affect the physiology and microbial diversity of the Purple-Hinge Rock Scallop. Comparative Biochemistry and Physiology, Part A. 240:110579
2019
Axworthy J & Padilla-Gamiño JL (2019) Microplastics ingestion by thermally stressed reef building corals. Scientific Reports 9:18193 (press release).
Price NN, Muko S, Legendre L, Steneck R,…. Padilla-Gamiño JL, …Edmunds P (2019) Global biogeography of coral recruitment: tropical decline and subtropical increase. Marine Ecology Progress Series 621:1-17 (press release).
Padilla-Gamiño JL, Roth MS, Rodrigues LJ, Bradley CJ, Bidigare RR, Gates RD, Smith CM, Spalding HL (2019) Ecophysiology of mesophotic reef-building corals in Hawaii is influenced by symbiont-host associations, trophic plasticity and photoacclimatization processes.
Limnology and Oceanography (press release/video link).
Spalding HL, Bowen B, Copus, J, Kosaki R, Longenecker K, Montgomery A, Padilla-Gamiño JL, Parrish F, Roth MS, Toonen R, Pyle R. (2019) Mesophotic Coral Ecosystems in Hawaii. In Puglise, K, Loya, Y and Bridge, T (Eds.). Coral Reefs of the World: Mesophotic Ecosystems. Springer.
2016
Padilla-Gamiño JL, Gaitán-Espitia JD, Kelly M, Hofmann GE (2016) Physiological plasticity and local adaptation to elevated pCO2 in calcareous algae: An ontogenic and geographic approach. Evolutionary Applications (invited special issue) 9(9):1043-1053.
2015
Kelly M, Padilla-Gamiño JL, Hofmann GE (2015) High pCO2 affects body size, but not gene expression in larvae of the California mussel (Mytilus californianus) ICES Journal of Marine Science doi:10.1093/icesjms/fsv184
Evans TG, Padilla-Gamiño JL, Kelly M, Pespeni MH, Chan F, Menge BA, Gaylord B, Hill TM, Russell AD, Palumbi SR, Sanford E, Hofmann GE (2015) Ocean acidification research in the 'post-genomic'era: roadmaps from the purple sea urchin Strongylocentrotus purpuratus. Comparative Biochemistry and Physiology Part A. 185:33-42.
Ainsworth T, Bridge T, Torda G, Raina JB, Gates RD, Padilla-Gamiño JL, Smith C, Woosley E, Krausse L, Zakrzewski M, Bongaerts P, Spalding H, Bourne D, Hoegh-Guldberg O, Leggat B (2015) The coral core microbiome identifies rare bacterial taxa as ubiquitous endosymbionts. ISME Journal 9:2261–2274.
Pochon X, Forsman Z, Spalding H, Padilla-Gamiño JL, Smith C, Gates RD (2015) Depth zonation and sympatric cryptic diversity in a Hawaiian deep water coral (Leptoseris spp.) and associated algal symbionts. Royal Society Open Science 2:140351.
Hagedorn M, Carter V, Farrell A, Zuchowicz N, Johnston E, Padilla-Gamiño JL, Gunasekera S, Paul V (2015) Effects of toxic compounds in Montipora capitata on exogenous and endogenous zooxanthellae performance and fertilization success. PLoS ONE 10(2):e0118364.
Edmunds PJ, Steneck R, Albright R, Carpenter R, Chuie A, Fan T-Y, Harii S, Kitano H, Kurihara H, Legendre L, Mitarai S, Muko S, Nozawa Y, Padilla-Gamiño JL, Price N, Sakai K, Suzuki G, van Oppen M, Yarid A, Satoh NL, Gates RD (2015) Geographic variation in long-term trajectories of change in coral recruitment: a global-to-local perspective. Marine & Freshwater Research 66(7):609-622.
Roth M, Padilla-Gamiño JL, Pochon X, Spalding H, Smith C, Bidigare R, Gates RD (2015) Fluorescent protein expression in mesophotic reef-building corals. Marine Ecology Progress Series 521:63-79.
Kelly M, Padilla-Gamiño JL, Hofmann GE (2015) High pCO2 affects body size, but not gene expression in larvae of the California mussel (Mytilus californianus) ICES Journal of Marine Science doi:10.1093/icesjms/fsv184
Evans TG, Padilla-Gamiño JL, Kelly M, Pespeni MH, Chan F, Menge BA, Gaylord B, Hill TM, Russell AD, Palumbi SR, Sanford E, Hofmann GE (2015) Ocean acidification research in the 'post-genomic'era: roadmaps from the purple sea urchin Strongylocentrotus purpuratus. Comparative Biochemistry and Physiology Part A. 185:33-42.
Ainsworth T, Bridge T, Torda G, Raina JB, Gates RD, Padilla-Gamiño JL, Smith C, Woosley E, Krausse L, Zakrzewski M, Bongaerts P, Spalding H, Bourne D, Hoegh-Guldberg O, Leggat B (2015) The coral core microbiome identifies rare bacterial taxa as ubiquitous endosymbionts. ISME Journal 9:2261–2274.
Pochon X, Forsman Z, Spalding H, Padilla-Gamiño JL, Smith C, Gates RD (2015) Depth zonation and sympatric cryptic diversity in a Hawaiian deep water coral (Leptoseris spp.) and associated algal symbionts. Royal Society Open Science 2:140351.
Hagedorn M, Carter V, Farrell A, Zuchowicz N, Johnston E, Padilla-Gamiño JL, Gunasekera S, Paul V (2015) Effects of toxic compounds in Montipora capitata on exogenous and endogenous zooxanthellae performance and fertilization success. PLoS ONE 10(2):e0118364.
Edmunds PJ, Steneck R, Albright R, Carpenter R, Chuie A, Fan T-Y, Harii S, Kitano H, Kurihara H, Legendre L, Mitarai S, Muko S, Nozawa Y, Padilla-Gamiño JL, Price N, Sakai K, Suzuki G, van Oppen M, Yarid A, Satoh NL, Gates RD (2015) Geographic variation in long-term trajectories of change in coral recruitment: a global-to-local perspective. Marine & Freshwater Research 66(7):609-622.
Roth M, Padilla-Gamiño JL, Pochon X, Spalding H, Smith C, Bidigare R, Gates RD (2015) Fluorescent protein expression in mesophotic reef-building corals. Marine Ecology Progress Series 521:63-79.
2014
Gaitán-Espitia JD, Hancock JR, Padilla-Gamiño JL, Rivest EB, Blanchette CA, Reed DC, Hofmann GE (2014) Interactive effects of elevated temperature and pCO2 on early-life history stages of the giant kelp Macrocystis pyrifera. Journal of Experimental Marine Biology & Ecology 457:51-58.
Padilla-Gamiño JL, Hédouin L, Waller RG, Smith D, Truong W & Gates RD (2014) Sedimentation and reproductive biology of the Hawaiian reef building coral Montipora capitata. Biological Bulletin 226:8-18.
Hofmann GE, Evans TG, Kelly MW, Padilla-Gamiño JL, Blanchette CA, Washburn L, Chan F, McManus M, Menge BA, Gaylord BP, Hill TM, Sanford E, LaVigne M, Rose J, Kapsenberg L & Dutton J (2014) Exploring local adaptation and the ocean acidification seascape- studies in the California Current Large Marine Ecosystem. Biogeosciences 11:1053-1064.
Gaitán-Espitia JD, Hancock JR, Padilla-Gamiño JL, Rivest EB, Blanchette CA, Reed DC, Hofmann GE (2014) Interactive effects of elevated temperature and pCO2 on early-life history stages of the giant kelp Macrocystis pyrifera. Journal of Experimental Marine Biology & Ecology 457:51-58.
Padilla-Gamiño JL, Hédouin L, Waller RG, Smith D, Truong W & Gates RD (2014) Sedimentation and reproductive biology of the Hawaiian reef building coral Montipora capitata. Biological Bulletin 226:8-18.
Hofmann GE, Evans TG, Kelly MW, Padilla-Gamiño JL, Blanchette CA, Washburn L, Chan F, McManus M, Menge BA, Gaylord BP, Hill TM, Sanford E, LaVigne M, Rose J, Kapsenberg L & Dutton J (2014) Exploring local adaptation and the ocean acidification seascape- studies in the California Current Large Marine Ecosystem. Biogeosciences 11:1053-1064.
2013
Briggs RA*, Padilla-Gamiño JL*, Bidigare RR, Gates RD & Ruttenberg KC (2013) Impact of coral spawning on the biogeochemistry of a Hawaiian reef. Estuarine, Coastal and Shelf Science 134:57-68 [*Authors contributed equally to this work]
Kelly MW*, Padilla-Gamiño JL* & Hofmann GE (2013) Natural variation, and the capacity to adapt to ocean acidification in the keystone sea urchin Strongylocentrotus purpuratus. Global Change Biology 19(8):2536-2546 [*Authors contributed equally to this work]
Padilla-Gamiño JL, Kelly MW, Evans T & Hofmann GE (2013) Temperature and CO2 additively regulate physiology, morphology, and genomic responses of larval sea urchins, Strongylocentrotus purpuratus. Proceedings of the Royal Society B 280 (1759): 20130155.
Padilla-Gamiño JL, Bidigare R, Barshis DJ, Alamaru A, Hédouin L, Hernández-Pech X, Kandel F, Leon Soon S, Roth MS, Rodrigues LJ, Grottoli AG, Portocarrero C, Wagenhauser S, Buttler F & Gates RD (2013) Are all eggs created equal? A case study from the Hawaiian reef building coral Montipora capitata. Coral Reefs 32(1): 137-152.
Briggs RA*, Padilla-Gamiño JL*, Bidigare RR, Gates RD & Ruttenberg KC (2013) Impact of coral spawning on the biogeochemistry of a Hawaiian reef. Estuarine, Coastal and Shelf Science 134:57-68 [*Authors contributed equally to this work]
Kelly MW*, Padilla-Gamiño JL* & Hofmann GE (2013) Natural variation, and the capacity to adapt to ocean acidification in the keystone sea urchin Strongylocentrotus purpuratus. Global Change Biology 19(8):2536-2546 [*Authors contributed equally to this work]
Padilla-Gamiño JL, Kelly MW, Evans T & Hofmann GE (2013) Temperature and CO2 additively regulate physiology, morphology, and genomic responses of larval sea urchins, Strongylocentrotus purpuratus. Proceedings of the Royal Society B 280 (1759): 20130155.
Padilla-Gamiño JL, Bidigare R, Barshis DJ, Alamaru A, Hédouin L, Hernández-Pech X, Kandel F, Leon Soon S, Roth MS, Rodrigues LJ, Grottoli AG, Portocarrero C, Wagenhauser S, Buttler F & Gates RD (2013) Are all eggs created equal? A case study from the Hawaiian reef building coral Montipora capitata. Coral Reefs 32(1): 137-152.
2012
Padilla-Gamiño JL, Hanson K, Stat M & Gates RD (2012) Phenotypic plasticity of the coral Porites rus: acclimatization responses to a turbid environment. Journal of Experimental Marine Biology & Ecology 434-435: 71-80.
Padilla-Gamiño JL, Pochon X, Bird C, Concepcion G & Gates RD (2012) From Parent to Gamete: Vertical transmission of Symbiodinium (Dinophyceae) ITS2 Sequence Assemblages in the Reef Building Coral Montipora capitata. PLoS ONE 7(6): e38440. doi:10.1371/journal.pone.0038440.
Padilla-Gamiño JL & Gates RD (2012) Spawning dynamics in the Hawaiian reef building coral Montipora capitata. Marine Ecology Progress Series 449: 145-160.
Padilla-Gamiño JL, Hanson K, Stat M & Gates RD (2012) Phenotypic plasticity of the coral Porites rus: acclimatization responses to a turbid environment. Journal of Experimental Marine Biology & Ecology 434-435: 71-80.
Padilla-Gamiño JL, Pochon X, Bird C, Concepcion G & Gates RD (2012) From Parent to Gamete: Vertical transmission of Symbiodinium (Dinophyceae) ITS2 Sequence Assemblages in the Reef Building Coral Montipora capitata. PLoS ONE 7(6): e38440. doi:10.1371/journal.pone.0038440.
Padilla-Gamiño JL & Gates RD (2012) Spawning dynamics in the Hawaiian reef building coral Montipora capitata. Marine Ecology Progress Series 449: 145-160.
2011
Padilla-Gamiño JL, Weatherby T, Waller R & Gates RD (2011) Formation and structural organization of the egg-sperm bundle of the coral Montipora capitata. Coral Reefs 30(2): 371-380.
Padilla-Gamiño JL, Weatherby T, Waller R & Gates RD (2011) Formation and structural organization of the egg-sperm bundle of the coral Montipora capitata. Coral Reefs 30(2): 371-380.
2007
Padilla-Gamiño JL & Carpenter R (2007) Seasonal acclimatization of Asparagopsis taxiformis from different biogeographic regions. Limnology & Oceanography 52(2): 833-842.
Padilla-Gamiño JL & Carpenter R (2007) Thermal ecophysiology of Laurencia pacifica and Laurencia nidifica (Ceramiales) from tropical and warm-temperate regions. Journal of Phycology 43(4): 686-692.
Gaidos E, Dubuc T, Dunford M, McAndrew P, Padilla-Gamiño JL, Studer B, Weersing K & Stanley S. (2007) The Precambrian Emergence of Animal Life: A Geobiological Perspective. Geobiology 5(4): 351-373.
Padilla-Gamiño JL & Carpenter R (2007) Seasonal acclimatization of Asparagopsis taxiformis from different biogeographic regions. Limnology & Oceanography 52(2): 833-842.
Padilla-Gamiño JL & Carpenter R (2007) Thermal ecophysiology of Laurencia pacifica and Laurencia nidifica (Ceramiales) from tropical and warm-temperate regions. Journal of Phycology 43(4): 686-692.
Gaidos E, Dubuc T, Dunford M, McAndrew P, Padilla-Gamiño JL, Studer B, Weersing K & Stanley S. (2007) The Precambrian Emergence of Animal Life: A Geobiological Perspective. Geobiology 5(4): 351-373.
Academia link: https://csudh.academia.edu/JacquelinePadillaGamino
